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1
A gray box framework that optimizes a white box logical model using a black box optimizer for simulating cellular responses to perturbations

Kim, Yunseong; Han, Younghyun; Hopper, Corbin; Lee, Jonghoon; Joo, Jae Il; Gong, Jeong-Ryeol; Lee, Chun-Kyung; et al, Cell Reports Methods, v.4, no.5, 2024-05

2
Analysis of phenotypic network changes along with the sequential occurrence of driver mutations during colorectal tumorigenesis

Gong, Jeong-Ryeol; Shin, Dongkwan; Lee, Jong-Hoon; Cho, Kwang-Hyun, Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Proc. 18th Int. Conf. on Systems Biology (ICSB2017), 2017-08-07

3
Attractor landscape analysis of the cardiac signaling network reveals mechanism-based therapeutic strategies for heart failure

Park, Daebeon; Lee, Ho-Sung; Kang, Jun Hyuk; Kim, Seon-Myeong; Gong, Jeong-Ryeol; Cho, Kwang-Hyun, JOURNAL OF MOLECULAR CELL BIOLOGY, v.10, no.3, pp.180 - 194, 2018-06

4
Cell-type specific optimized therapy for colorectal cancer based on dynamical analysis of variant network models

Park, Sang-Min; Hwang, Chae-Young; Lee, Daewon; Gong, Jeong-Ryeol; Cho, Kwang-Hyun, Proc. 18th Int. Conf. on Systems Biology (ICSB2017), Proc. 18th Int. Conf. on Systems Biology (ICSB2017), 2017-08-07

5
Context-independent essential regulatory interactions for apoptosis and hypertrophy in the cardiac signaling network

Kang, Jun Hyuk; Lee, Ho-Sung; Park, Daebeom; Kang, Yun-Won; Kim, Seon Myeong; Gong, Jeong-Ryeol; Cho, Kwang-Hyun, SCIENTIFIC REPORTS, v.7, 2017-02

6
Percolation transition of cooperative mutational effects in colorectal tumorigenesis

Shin, Dongkwan; Lee, Jong-Hoon; Gong, Jeong-Ryeol; Cho, Kwang-Hyun, NATURE COMMUNICATIONS, v.8, 2017-11

7
Predictive factors and synergistic combinatorial targets for cetuximab resistance in colorectal cancer cells

Hwang, Chae Young; Park, Sang-Min; Cho, Sung-Hwan; Lee, Daewon; Gong, Jeong-Ryeol; Cho, Kwang-Hyun, EMBL Conference: Cancer Genomics, European Molecular Biology Laboratory (EMBL), 2017-11-06

8
PRRX1 is a master transcription factor of stromal fibroblasts for myofibroblastic lineage progression

Lee, Keun-Woo; Yeo, So-Young; Gong, Jeong-Ryeol; Koo, Ok-Jae; Sohn, Insuk; Lee, Woo Yong; Kim, Hee Cheol; et al, NATURE COMMUNICATIONS, v.13, no.1, 2022-05

9
Systems analysis identifies potential target genes to overcome cetuximab resistance in colorectal cancer cells

Park, Sang-Min; Hwang, Chae Young; Cho, Sung-Hwan; Lee, Daewon; Gong, Jeong-Ryeol; Lee, Soobeom; Nam, Sohee; et al, FEBS JOURNAL, v.286, no.7, pp.1305 - 1318, 2019-04

10
The infusion of ex vivo, interleukin-15 and-21-activated donor NK cells after haploidentical HCT in high-risk AML and MDS patients-a randomized trial

Lee, Kyoo-Hyung; Yoon, Suk Ran; Gong, Jeong-Ryeol; Choi, Eun-Ji; Kim, Hun Sik; Park, Chan-Jeoung; Yun, Sung-Cheol; et al, LEUKEMIA, v.37, no.4, pp.807 - 819, 2023-04

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