Estimating the deflection of flexible composite wind turbine blades is very important to prevent the blades from hitting the tower. Several researchers have used fiber Bragg grating (FBG) sensors-a type of optical fiber sensor (OFS)-to monitor the structural behavior of the blades. They can be installed on the surface and/or embedded in the interior of composites. However, the typical installation positions of OFSs present several problems, including delamination of sensing probes and a higher risk of fiber breakage during installation. In this study, we proposed using the bonding line between the shear web and spar cap as a new installation position of embedded OFSs for estimating the deflection of the blades. Laboratory coupon tests were undertaken preliminarily to confirm the strain measuring capability of embedded FBG sensors in adhesive layers, and the obtained values were verified by comparison with results obtained by electrical strain gauges and finite element analysis. We performed static loading tests on a 100 kW composite wind turbine blade to evaluate its deflections using embedded FBG sensors positioned in the bonding line. The deflections were estimated by classical beam theory considering a rigid body rotation near the tip of the blade. The evaluated tip deflections closely matched those measured by a linear variable differential transformer. Therefore, we verified the capability of embedded FBG sensors for evaluating the deflections of wind turbine blades. In addition, we confirmed that the bonding line between the shear web and spar cap is a practical location to embed the FBG sensors.