Browse "Dept. of Chemical and Biomolecular Engineering(생명화학공학과)" by Author Ryu, Jae Yong
Showing results 1 to 60 of 66
| A computational framework for automated enzyme selection using structural information JANG, WOO DAE; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 한국화학공학회 2019년도 가을 총회 및 학술대회, 한국화학공학회, 2019-10-25 |
| A Computational Pipeline for Automated Selection of Enzymes Using Enzyme-Substrate Interactions JANG, WOO DAE; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2019년 한국미생물·생명공학회 국제학술대회 및 정기학술대회, 한국미생물·생명공학회, 2019-06-24 |
| A deep learning approach to evaluate the feasibility of enzymatic reactions generated by retrobiosynthesis Kim, Yeji; Ryu, Jae Yong; Kim, Hyun Uk; Jang, Woo Dae; Lee, Sang Yup, BIOTECHNOLOGY JOURNAL, v.16, no.5, pp.1 - 7, 2021-05 |
| A Framework for 11,000+ Gene-Transcript-Protein-Reaction Associations (Getpra) in Human Metabolism and Integrated Resources Gu, Changdai; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2018 KSBB International Academia-Indestry Joint Meeting, The Korean Society for Biotechnology and Bioengineering, 한국생물공학회, 2018-10-11 |
| A systematic framework for gene-transcript-protein-reaction associations of human metabolism Kim, YJ; Kim, Hyun Uk; Ryu, Jae Yong; Lee, Sang Yup, 한국화학공학회 2019년도 가을 총회 및 학술대회, 한국화학공학회, 2019-10-25 |
| A systems approach to traditional oriental medicine Kim, Hyun Uk; Ryu, Jae Yong; Lee, Jong Ok; Lee, Sang Yup, NATURE BIOTECHNOLOGY, v.33, no.3, pp.264 - 268, 2015-03 |
| Application of flux-coupled genes in flux balance analysis Lee, Sang Yup; Ryu, Jae Yong; 김현욱; Kim, Won Jun, Annual Fall meeting of KIChE 2013, 한국화학공학회, 2013-10 |
Bacterial cellulose as an example product for sustainable production and consumption Jang, Woo Dae; Hwang, Ji Hyeon; Kim, Hyun Uk; Ryu, Jae Yong; Lee, Sang Yup, MICROBIAL BIOTECHNOLOGY, v.10, no.5, pp.1181 - 1185, 2017-09 |
| Characterization of Metabolism in Liver Cancer Stem Cell Using Systems Biologic Methods Gu, Changdai; Ryu, Jae Yong; Hur, W; Kim, Hyun Uk; Hong, SW; Lee, EB; Yoon, SK; et al, 2018 KSBB International Academia-Indestry Joint Meeting, The Korean Society for Biotechnology and Bioengineering, 한국생물공학회, 2018-10-11 |
| Characterizing Metabolism of Liver Cancer Stem Cell Using Systems Biological Methods Gi Bae, Kim; Ryu, Jae Yong; Hur, W; Kim, Hyun Uk; Hong, SW; Lee, EB; Lee, Sang Yup; et al, 2019년 한국미생물·생명공학회 국제학술대회 및 정기학술대회, 한국미생물·생명공학회, 2019-06-24 |
| Computational prediction of interactions between Paxlovid and prescription drugs Kim, Yeji; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v.120, no.12, 2023-03 |
| Deep learning enables high-quality and high-throughput prediction of enzyme commission numbers Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v.116, no.28, pp.13996 - 14001, 2019-07 |
| Deep learning for prediction of drug-drug and drug-food interactions JANG, WOO DAE; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 한국화학공학회 2019년도 가을 총회 및 학술대회, 한국화학공학회, 2019-10-25 |
| Deep learning improves prediction of drug-drug and drug-food interactions Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v.115, no.18, pp.E4304 - E4311, 2018-05 |
| Deep learning-based prediction of drug-drug and drug-food interactions JANG, WOO DAE; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2018 KIChE Fall Meeting and International Symposium, The Korean Institute of Chemical Engineers, 한국화학공학회, 2018-10-25 |
| DeepDDI: A Computational Framework for the Prediction of Drug Interactions Using Deep Learning Jeon, J; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2019년 한국미생물·생명공학회 국제학술대회 및 정기학술대회, 한국미생물·생명공학회, 2019-06-24 |
| DeepEC: fine-quality prediction of enzyme commission numbers using deep learning Kim, YJ; Kim, Hyun Uk; Ryu, Jae Yong; Lee, Sang Yup, 한국화학공학회 2019년도 가을 총회 및 학술대회, 한국화학공학회, 2019-10-25 |
| Design and Extension of Novel Biochemical Synthetic Pathways for Production of Industrially Valuable Chemicals Ryu, Jae Yong; Kim, DI; Lee, Sang Yup, 2018 KSBB Spring Meeting and International Symposium, The Korean Society for Biotechnology and Bioengineering, 한국생물공학회, 2018-04-19 |
| Design of novel biosynthetic pathways for the production of high value-added chemicals Ryu, Jae Yong; Kim, Dong In; Cho, Ayoun; Yun, Hong-Seok; Park, Jin-Hwan; Park, Sun-Won; Lee, Sang Yup, 2015 KSBB Spring Meeting and International Symposium, 한국생물공학회, 2015-04-15 |
| Design of Novel Biosynthetic Pathways for Various Valuable Chemicals Ryu, Jae Yong; Kim, Dong In; Cho, Ayoun; Yun, Hong-Seok; Park, Jin-Hwan; Lee, Sang Yup, 2016 KSBB Spring Meeting and International Symposium, 한국생물공학회, 2016-04-20 |
| Development of de novo C1 Assimilation Cycle in Escherichia coli Ryu, Jae Yong; JUNHO, BANG; Lee, Sang Yup, 44th Annual Meeting & International Symposium, The Korean Society for Microbiology and Biotechnology, 2017-06-29 |
| Development of multi-component multi-target methods for therapeutic applications = 의학적 응용을 위한 다중성분-다중표적 방법론 개발link Ryu, Jae Yong; Lee, SangYup; et al, 한국과학기술원, 2018 |
| Development of Rapid and Multiplex Knockdown Platform in Escherichia coli Using Expanded Synthetic sRNA Expression System Yang, Dongsoo; Yoo, Seung Min; Gu, Changdai; Ryu, Jae Yong; Lee, JE; Lee, Sang Yup, 2019 한국생물공학회 추계학술발표대회 및 국제심포지엄, 한국생물공학회, 2019-10-11 |
| Development of Rapid and Multiplex Metabolic Engineering Platform Using Expanded sRNA Expression System in Escherichia coli Gu, Changdai; Yang, Dongsoo; Yoo, Seung Min; Ryu, Jae Yong; Lee, JE; Lee, Sang Yup, 2019년 한국미생물·생명공학회, 한국미생물·생명공학회, 2019-06-24 |
| Development of synthetic sRNAs tool for targeted and high-throughput gene knockdown in diverse bacteria Cho, Jae Sung; Yang, Dongsoo; Prabowo, Cindy Pricilia Surya; Ghiffary, Mohammad Rifqi; Han, Taehee; Choi, Kyeong Rok; Moon, Cheon Woo; et al, Metabolic Engineering 15, American Institute of Chemical Engineers (AIChE), 2023-06-11 |
| Efficient Production of Succinic acid in Mannheimia Succiniciproducens Based on Elementary Mode Analysis with Clustering Ryu, Jae Yong; Kim, Won Jun; Ahn, Jung Ho; Kim, Hyun Uk; Kim, Tae Yong; Lee, Sang Yup, 44th Annual Meeting & International Symposium, The Korean Society for Microbiology and Biotechnology, 2017-06-29 |
| Efficient production of valuable compounds using genome-wide identification of overexpression and downregulation gene targets Kim, Won Jun; Lee, Youngjoon; Kim, Hyun Uk; Ryu, Jae Yong; Yang, Jung Eun; Lee, Sang Yup, 2023 KSBB Fall Meeting and International Symposium, The Korean Society of Biotechnology and Bioengineering, 2023-10-06 |
| Elementary Mode Analysis of Mannheimia succiniciproducens for Efficient Succinic Acid Production Ryu, Jae Yong; Kim, Won Jun; Choi, Sol; Kim, Hyun Uk; Lee, Sang Yup, 2016 KSBB Spring Meeting and International Symposium, 한국생물공학회, 2016-04-20 |
| Enhanced prediction of drug interactions using deep learning in drug-drug and drug-food interactions expanded to interaction of Paxlovid Kim, Yeji; Ryu, Jae Yong; Kim, Hyun Uk; Yu, Taeho; Lee, Sang Yup, Metabolic Engineering 15, American Institute of Chemical Engineers (AIChE), 2023-06-11 |
| Expanded synthetic small regulatory RNA expression platforms for rapid and multiplex gene expression knockdown Yang, Dongsoo; Yoo, Seung Min; Gu, Changdai; Ryu, Jae Yong; Lee, Jae Eun; Lee, Sang Yup, METABOLIC ENGINEERING, v.54, pp.180 - 190, 2019-07 |
| Expression of Recombinant Spider Silk Protein in Escherichia coli through Metabolic Engineering Ryu, Jae Yong; Chung, Hannah; Xia, Xiao Xia; Lee, Sang Yup, 2018 KSBB Spring Meeting and International Symposium, The Korean Society for Biotechnology and Bioengineering, 한국생물공학회, 2018-04-19 |
| Framework and resource for more than 11,000 gene-transcript-protein-reaction associations ( GeTPRA) in human metabolism Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, Metabolic Engineering 2018, International Metabolic Engineering Society (IMES), 2018-06-25 |
| Framework and resource for more than 11,000 gene-transcript-protein-reaction associations (GeTPRA) in human metabolism Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2018 KSBB Spring Meeting and International Symposium, The Korean Society for Biotechnology and Bioengineering, 한국생물공학회, 2018-04-19 |
| Framework and resource for more than 11,000 gene-transcript-protein-reaction associations in human metabolism Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v.114, no.45, pp.E9740 - E9749, 2017-11 |
| Fumaric Acid Production from Glucose by a Metabolically Engineered Escherichia coli Ryu, Jae Yong; Kim, Je Woong; Song, Chan Woo; Kim, DI; Choi, S; JANG, WOO DAE; Lee, Sang Yup, 2018 KSBB Spring Meeting and International Symposium, The Korean Society for Biotechnology and Bioengineering, 한국생물공학회, 2018-04-19 |
| Genetic Algorithm Based Multi-Objective Optimization for in silico Metabolic Engineering Ryu, Jae Yong; Kim, Won Jun; Kim, Hyun Uk; Lee, Sang Yup, 44th Annual Meeting & International Symposium, The Korean Society for Microbiology and Biotechnology, 2017-06-29 |
| Genome-scale Reconstruction of the metabolic network Lee, Sang Yup; Ryu, Jae Yong; SHON, S.B., Annual Fall meeting of KIChE 2013, 한국화학공학회, 2013-10 |
| Genome-wide identification of overexpression and downregulation gene targets based on the sum of covariances of the outgoing reaction fluxes Kim, Won Jun; Lee, Youngjoon; Kim, Hyun Uk; Ryu, Jae Yong; Yang, Jung Eun; Lee, Sang Yup, CELL SYSTEMS, v.14, no.11, pp.990 - 1001, 2023-11 |
| Genomic and metabolic analysis of Komagataeibacter xylinus DSM 2325 producing bacterial cellulose nanofiber Jang, Woo Dae; Kim, Tae Yong; Kim, Hyun Uk; Shim, Woo Yong; Ryu, Jae Yong; Park, Jin Hwan; Lee, Sang Yup, BIOTECHNOLOGY AND BIOENGINEERING, v.116, no.12, pp.3372 - 3381, 2019-12 |
| Human genes with a greater number of transcript variants tend to have biologically important roles Kim, Won Jun; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2016 KIChE Spring Meeting, 한국화학공학회, 2016-04-27 |
| Human Genes with a Greater Number of Transcript Variants Tend to Show Biological Features of Housekeeping and Essential Genes Hwang, Kyu-Sang; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 30th Aniversary Meeting and International Symposium of KSBB, 한국생물공학회, 2015-10 |
| Human genes with a greater number of transcript variants tend to show biological features of housekeeping and essential genes Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, MOLECULAR BIOSYSTEMS, v.11, no.10, pp.2798 - 2807, 2015-10 |
| Identification of metabolic characteristics of liver cancer stem cells by integrative systems Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang-Yup, 16th European Congress on Biotechnology, European Federation of Biotechnology, 2014-07 |
| Metabolic responses of host microorganisms against introducing heterologous reactions Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2015 KSBB Spring Meeting and International Symposium, 한국생물공학회, 2015-04-15 |
| Method for predicting drug-drug or drug-food interaction by using structural information of drug Lee, Sang Yup; Ryu, Jae Yong; Kim, Hyun Uk |
| Microbial Production of Gamma-butyrolactone Using Metabolically Engineered Mannheimia Succiniciproducens Ryu, Jae Yong; Ahn, Jung Ho; Choi, Sol; Lee, Sang Yup, 2016 KSBB Spring Meeting and International Symposium, 한국생물공학회, 2016-04-20 |
| Occurrence, evolution, and functions of DNA phosphorothioate epigenetics in bacteria Tong, Tong; Chen, Si; Wang, Lianrong; Tang, You; Ryu, Jae Yong; Jiang, Susu; Wu, Xiaolin; et al, PROCEEDINGS OF THE NATIONAL ACADEMY OF SCIENCES OF THE UNITED STATES OF AMERICA, v.115, no.13, pp.E2988 - E2996, 2018-03 |
| Pathway prediction for the production of high value-added chemicals Lee, Sang Yup; Ryu, Jae Yong; Kim, Dong In; CHO, A.; YUN, H.; PARK, J.H., Annual Fall meeting of KIChE 2013, 한국화학공학회, 2013-10 |
| Prediction of Drug-Drug and Drug-Food Interactions Using Deep Learning Methods Gu, Changdai; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2018 KSBB International Academia-Indestry Joint Meeting, The Korean Society for Biotechnology and Bioengineering, 한국생물공학회, 2018-10-11 |
| Prediction of metabolites from cancer-associated fibroblasts that can have profound effects on cancer cells Jung, Hae Deok; Sung, Yoo Jin; Ryu, Jae Yong; Kim, Hyun Uk, AACR Annual Meeting 2023, American Association for Cancer Research (AACR), 2023-04-17 |
| Production of ethylene glycol from xylose by metabolically engineered Escherichia coli Chae, Tong Un; Choi, So Young; Ryu, Jae Yong; Lee, Sang Yup, AICHE JOURNAL, v.64, no.12, pp.4193 - 4200, 2018-12 |
| Reconstruction and Application of a High-Quality Human Genome-Scale Metabolic Model Lee, G; Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2019년 한국미생물·생명공학회 국제학술대회 및 정기학술대회, 한국미생물·생명공학회, 2019-06-24 |
| Reconstruction of context-specific genome-scale metabolic models using multiomics data to study metabolic rewiring Cho, Jae Sung; Gu, Changdai; Han, Taehee; Ryu, Jae Yong; Lee, Sang Yup, Current Opinion in Systems Biology, v.15, pp.1 - 11, 2019-06 |
| Reconstruction of genome-scale human metabolic models using omics data Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, INTEGRATIVE BIOLOGY, v.7, no.8, pp.859 - 868, 2015-08 |
| Reconstruction of High-quality Universal Networks and Its Application for Systematic Refinement of Human Metabolic Model Ryu, Jae Yong; Kim, Hyun Uk; Lee, Sang Yup, 2016 KSBB Spring Meeting and International Symposium, 한국생물공학회, 2016-04-20 |
| Revisiting Statistical Design and Analysis in Scientific Research Choi, Kyeong Rok; Ryu, Jae Yong; Lee, Sang Yup, SMALL, v.14, no.40, 2018-10 |
| Strain development via systematic minimization of byproducts Ryu, Jae Yong; Kim, Hyun Uk; Park, Jong-Myoung; Lee, Sang Yup, 2015 KSBB Spring Meeting and International Symposium, 한국생물공학회, 2015-04-15 |
| Structural Similarity Analysis to Identify Human Pathways Potentially Targeted by Compounds in Traditional Oriental Medicine Hwang, Kyu-Sang; Kim, Hyun Uk; Ryu, Jae Yong; Lee, Sang Yup, 30th Aniversary Meeting and International Symposium of KSBB, 한국생물공학회, 2015-10 |
| Structural similarity analysis to identify human pathways potentially targeted by compounds in traditional oriental medicine Hwang, Kyu-Sang; Kim, Hyun Uk; Ryu, Jae Yong; Lee, Sang Yup, Metabolic Engineering Summit, International Metabolic Engineering Society (IMES), 2015-12-01 |
| Systematic Characterization of Liver Cancer Stem Cells Ryu, Jae Yong; Hur, W; Kim, Hyun Uk; Hong, SW; Lee, EB; Gu, Changdai; Lee, Sang Yup; et al, 2019 한국생물공학회 추계학술발표대회 및 국제심포지엄, 한국생물공학회, 2019-10-11 |
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