Structural Dynamics Modification is very effective technique to improve structure's dynamic characteristics by adding or removing auxiliary structures, changing material property, changing shape of structure. In this research, using the surface grooving technique, shape of base structure was changed to improve its first natural frequency. Utilizing the result of frequency variation analysis, groove shape was formed gathering the many small embossing elements. For this process, Criterion Factor was introduced. To reduce its amount of calculation, the range of target area was restricted to their neighboring area and initial grooving point was selected using high-strain energy. This surface grooving technique was successfully applied to the HDD cover model.