Browse "Dept. of Bio and Brain Engineering(바이오및뇌공학과)" by Subject DATABASE

Showing results 1 to 47 of 47

1
A computational pipeline for protein structure prediction and analysis at genome scale

Shah, M; Passovets, S; Kim, Dongsupresearcher; Ellrott, K; Wang, L; Vokler, I; LoCascio, P; et al, BIOINFORMATICS, v.19, no.15, pp.1985 - 1996, 2003-10

2
A corpus for plant-chemical relationships in the biomedical domain

Choi, Wonjun; Kim, Baeksoo; Cho, Hyejin; Lee, Doheonresearcher; Lee, Hyunju, BMC BIOINFORMATICS, v.17, no.386, 2016-09

3
A feature-based approach to modeling proteinprotein interaction hot spots

Cho, Kyu-il; Kim, Dongsup; Lee, Doheonresearcher, NUCLEIC ACIDS RESEARCH, v.37, no.8, pp.2672 - 2687, 2009-05

4
Analysis of AML genes in dysregulated molecular networks

Lee, Eunjung; Jung, Hyunchul; Radivojac, Predrag; Kim, Jong-Won; Lee, Doheonresearcher, BMC BIOINFORMATICS, v.10, 2009

5
Annotating activation/inhibition relationships to protein-protein interactions using Gene Ontology relations

Yim, Soorin; Yu, Ha Sun; Jang, Dongjin; Lee, Doheonresearcher, BMC SYSTEMS BIOLOGY, v.12, 2018-04

6
Application of nonnegative matrix factorization to improve profile-profile alignment features for fold recognition and remote homolog detection

Jung, Inkyungresearcher; Lee, Jae-Hyung; Lee, Soo-Youngresearcher; Kim, Dong-Supresearcher, BMC BIOINFORMATICS, v.9, 2008-07

7
Architecture of basic building blocks in protein and domain structural interaction networks

Moon, HS; Bhak, Jresearcher; Lee, Kwang-Hyungresearcher; Lee, Doheonresearcher, BIOINFORMATICS, v.21, pp.1479 - 1486, 2005-04

8
Association analysis of the perturbation of interactions in biological pathways and anticancer drug activity

Lee, Junehawk; Lee, Doheonresearcher, BIOCHEMICAL AND BIOPHYSICAL RESEARCH COMMUNICATIONS, v.470, no.1, pp.137 - 143, 2016-01

9
AtRTPrimer : arabidopsis genome-wide homogeneous and specific RT-PCR primer-pairs database = 애기장대용 RT-PCR 프라이머 데이타베이스 구축link

Han, Sang-Jo; 한상조; et al, 한국과학기술원, 2004

10
Binding similarity network of ligand

Park, Keun-Wan; Kim, Dong-Supresearcher, PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, v.71, no.2, pp.960 - 971, 2008-05

11
Biological function integrated prediction of severe radiographic progression in rheumatoid arthritis: a nested case control study

Joo, Young Bin; Kim, Yul; Park, Youngho; Kim, Kwangwoo; Ryu, Jeong Ah; Lee, Seunghun; Bang, So-Young; et al, ARTHRITIS RESEARCH & THERAPY, v.19, 2017-10

12
Building a drug-target network and its applications

Lee, So-Young; Park, Keun-Wan; Kim, Dong-Supresearcher, EXPERT OPINION ON DRUG DISCOVERY, v.4, no.11, pp.1177 - 1189, 2009-11

13
Candidate target genes for the Saccharomyces cerevisiae transcription factor, Yap2

Bang, Seo Young; Kim, Jeong Hoon; Lee, Phil Young; Chi, Seung-Wook; Cho, Sayeon; Yi, Gwan-Suresearcher; Myung, Pyung Keun; et al, FOLIA MICROBIOLOGICA, v.58, no.5, pp.403 - 408, 2013-09

14
CODA-ML: context-specific biological knowledge representation for systemic physiology analysis

Kwon, Mijin; Yim, Soorin; Kim, Gwangmin; Lee, Saehwan; Jeong, Chungsun; Lee, Doheonresearcher, BMC BIOINFORMATICS, v.20, 2019-05

15
CODA: Integrating multi-level context-oriented directed associations for analysis of drug effects

Hasun Yu; Jinmyung Jung; Yoon, Seyeol; Kwon, Mijin; Bae, Sunghwa; Yim, Soorin; Lee, Jaehyun; et al, SCIENTIFIC REPORTS, v.7, pp.7519, 2017-08

16
Context-dependent transcriptional regulations between signal transduction pathways

Hwang, Sohyun; Kim, Sangwoo; Shin, Heesung; Lee, Doheonresearcher, BMC BIOINFORMATICS, v.12, 2011-01

17
DAhunter: a web-based server that identifies homologous proteins by comparing domain architecture

Byungwook Lee; Lee, Doheonresearcher, NUCLEIC ACIDS RESEARCH, v.36, pp.W60 - W64, 2008-07

18
Detection and analysis of disease-associated single nucleotide polymorphism influencing post-translational modification

Kim, Yul; Kang, Chiyong; Min, Bumki; Yi, Gwan-Suresearcher, BMC MEDICAL GENOMICS, v.8, 2015

19
Discovering Health Benefits of Phytochemicals with Integrated Analysis of the Molecular Network, Chemical Properties and Ethnopharmacological Evidence

Yoo, Sunyong; Kim, Kwansoo; Nam, Hojung; Lee, Doheonresearcher, NUTRIENTS, v.10, no.8, 2018-08

20
DNA methylation loss promotes immune evasion of tumours with high mutation and copy number load

Jung, Hyunchul; Kim, Hong Sook; Kim, Jeong Yeon; Sun, Jong-Mu; Ahn, Jin Seok; Ahn, Myung-Ju; Park, Keunchil; et al, NATURE COMMUNICATIONS, v.10, ACCEPT

21
Drug repositioning for enzyme modulator based on human metabolite-likeness

Lee, Yoon Hyeok; Choi, Hojae; Park, Seongyong; Lee, Boah; Yi, Gwan-Suresearcher, BMC BIOINFORMATICS, v.18, no.7, 2017-05

22
Fold recognition by combining profile-profile alignment and support vector machine

Han, Sang-Jo; Lee, Byung-chul; Yu, Seung-Taek; Jeong, Chan-Seok; Lee, So-Young; Kim, Dong-Supresearcher, BIOINFORMATICS, v.21, pp.2667 - 2673, 2005-06

23
HIDEEP: a systems approach to predict hormone impacts on drug efficacy based on effect paths

Kwon, Mijin; Jung, Jinmyung; Yu, Hasun; Lee, Doheonresearcher, SCIENTIFIC REPORTS, v.7, 2017-11

24
Identification of ubiquitin/ubiquitin-like protein modification from tandem mass spectra with various PTMs

Kang, Chiyong; Yi, Gwan-Suresearcher, BMC BIOINFORMATICS, v.12, 2011-12

25
In silico profiling of systemic effects of drugs to predict unexpected interactions

Yoo, Sunyong; Noh, Kyungrin; Shin, Moonshik; Park, Junseok; Lee, Kwang-Hyungresearcher; Nam, Hojung; Lee, Doheonresearcher, SCIENTIFIC REPORTS, v.8, 2018-01

26
Interaction between bound water molecules and local protein structures: A statistical analysis of the hydrogen bond structures around bound water molecules

Hong, Seungpyo; Kim, Dongsupresearcher, PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, v.84, no.1, pp.43 - 51, 2016-01

27
KRDS: a web server for evaluating drug resistance mutations in kinases by molecular docking

Lee, Aeri; Hong, Seungpyo; Kim, Dongsupresearcher, JOURNAL OF CHEMINFORMATICS, v.10, 2018-04

28
Large-scale reverse docking profiles and their applications

Lee, Min-Ho; Kim, Dong-Supresearcher, BMC BIOINFORMATICS, v.13, 2012-12

29
Linear predictive coding representation of correlated mutation for protein sequence alignment

Jeong, Chan-Seok; Kim, Dong-Supresearcher, BMC BIOINFORMATICS, v.11, no.sup.2, 2010-04

30
Meta-path Based Prioritization of Functional Drug Actions with Multi-Level Biological Networks

Yoon, Seyeol; Lee, Doheonresearcher, SCIENTIFIC REPORTS, v.9, 2019-04

31
Network-based classification of breast cancer metastasis

Chuang, HY; Lee, E; Liu, YT; Lee, Doheonresearcher; Ideker, T, MOLECULAR SYSTEMS BIOLOGY, v.3, pp.1073 - 1083, 2007-10

32
Oncopression: gene expression compendium for cancer with matched normal tissues

Lee, Jungsul; Choi, Chulheeresearcher, BIOINFORMATICS, v.33, no.13, pp.2068 - 2070, 2017-07

33
Petri net-based prediction of therapeutic targets that recover abnormally phosphorylated proteins in muscle atrophy

Jung, Jinmyung; Kwon, Mijin; Bae, Sunghwa; Yim, Soorin; Lee, Doheonresearcher, BMC SYSTEMS BIOLOGY, v.12, 2018-03

34
Phenotype-oriented network analysis for discovering pharmacological effects of natural compounds

Yoo, Sunyong; Nam, Hojung; Lee, Doheonresearcher, SCIENTIFIC REPORTS, v.8, 2018-08

35
PLPD: reliable protein localization prediction from imbalanced and overlapped datasets

Lee, KiYoung; Kim, Dae-Won; Na, DoKyun; Lee, Kwang-Hyungresearcher; Lee, Doheonresearcher, NUCLEIC ACIDS RESEARCH, v.34, no.17, pp.4655 - 4666, 2006-10

36
PostMod: sequence based prediction of kinase-specific phosphorylation sites with indirect relationship

Jung, Inkyungresearcher; Matsuyama, Akihisa; Yoshida, Minoru; Kim, Dong-Supresearcher, BMC BIOINFORMATICS, v.11, 2010

37
Predicting and improving the protein sequence alignment quality by support vector regression

Lee, Min-Ho; Jeong, Chan-Seok; Kim, Dong-Supresearcher, BMC BIOINFORMATICS, v.8, 2007-12

38
Predicting disease phenotypes based on the molecular networks with Condition-Responsive Correlation

Lee, Se-Joon; Lee, Eun-Jung; Lee, Kwang-Hyungresearcher; Lee, Do-Heonresearcher, INTERNATIONAL JOURNAL OF DATA MINING AND BIOINFORMATICS, v.5, no.2, pp.131 - 142, 2011-03

39
Prediction of compound-target interactions of natural products using large-scale drug and protein information

Keum, Jongsoo; Yoo, Sunyong; Lee, Doheonresearcher; Nam, Hojung, BMC BIOINFORMATICS, v.17, no.6, pp.219, 2016-07

40
Prediction of protein secondary structure content using amino acid composition an evolutionary information

Lee, S; Lee, BC; Kim, Dongsupresearcher, PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS, v.62, no.4, pp.1107 - 1114, 2006-03

41
Prediction of scaffold proteins based on protein interaction and domain architectures

Oh, Kimin; Yi, Gwan-Suresearcher, BMC BIOINFORMATICS, v.17, 2016-07

42
PROSPECT II: protein structure prediction program for genome-scale applications

Kim, Dongsupresearcher; Xu, D; Guo, JT; Ellrott, K; Xu, Y, PROTEIN ENGINEERING, v.16, no.9, pp.641 - 650, 2003-09

43
Protein comparison at the domain architecture level

Lee, Byungwook; Lee, Doheonresearcher, BMC BIOINFORMATICS, v.10, 2009

44
Reduction of Complex Signaling Networks to a Representative Kernel

Kim, Jeong-Rae; Kim, Junil; Kwon, Yung-Keun; Lee, Hwang-Yeol; Heslop-Harrison, Pat; Cho, Kwang-Hyunresearcher, SCIENCE SIGNALING (Featured Cover Article 선정. KBS, MBC 등 5개 주요 언론에 보도됨. 한겨레신문, 경향신문 등 8개 일간지에 보도됨. <2012년 기초연구 우수성과(교과부 R&D사업 대표성과)>로 선정), v.4, no.175, 2011-05

45
SigCS base: an integrated genetic information resource for human cerebral stroke

Park, Young-Kyu; Bang, Ok Sun; Cha, Min-Ho; Kim, Jaeheup; Cole, John W.; Lee, Doheonresearcher; Kim, Young Joo, BMC SYSTEMS BIOLOGY, v.5, no.2, 2011-12

46
The co-regulation mechanism of transcription factors in the human gene regulatory network

Kim, Junil; Choi, Minsoo; Kim, Jeong-Rae; Jin, Hua; Kim, V. Narry; Cho, Kwang-Hyunresearcher, NUCLEIC ACIDS RESEARCH, v.40, no.18, pp.8849 - 8861, 2012-10

47
Utilizing random Forest QSAR models with optimized parameters for target identification and its application to target-fishing server

Lee, Kyoung Yeul; Lee, Minho; Kim, Dongsupresearcher, BMC BIOINFORMATICS, v.18, 2017-12

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