Extraction of Gene-Environment Interaction from the Biomedical Literature

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dc.contributor.authorYou, Jinseonko
dc.contributor.authorChung, Jin-Wooko
dc.contributor.authorYang, Wonsukko
dc.contributor.authorPark, Jong-Cheolko
dc.date.accessioned2017-12-19T02:08:16Z-
dc.date.available2017-12-19T02:08:16Z-
dc.date.created2017-12-13-
dc.date.created2017-12-13-
dc.date.created2017-12-13-
dc.date.issued2017-11-30-
dc.identifier.citationProceedings of the 8th International Joint Conference on Natural Language Processing (IJCNLP 2017), pp.865 - 874-
dc.identifier.urihttp://hdl.handle.net/10203/228540-
dc.description.abstractGenetic information in the literature has been extensively looked into for the purpose of discovering the etiology of a disease. As the gene-disease relation is sensitive to external factors, their identification is important to study a disease. Environmental influences, which are usually called Gene-Environment interaction (GxE), have been considered as important factors and have extensively been researched in biology. Nevertheless, there is still a lack of systems for automatic GxE extraction from the biomedical literature due to new challenges: (1) there are no preprocessing tools and corpora for GxE, (2) expressions of GxE are often quite implicit, and (3) document-level comprehension is usually required. We propose to overcome these challenges with neural network models and show that a modified sequence-to-sequence model with a static RNN decoder produces a good performance in GxE recognition.-
dc.languageEnglish-
dc.publisherAsian Federation of Natural Language Processing (AFNLP) Associations-
dc.titleExtraction of Gene-Environment Interaction from the Biomedical Literature-
dc.typeConference-
dc.type.rimsCONF-
dc.citation.beginningpage865-
dc.citation.endingpage874-
dc.citation.publicationnameProceedings of the 8th International Joint Conference on Natural Language Processing (IJCNLP 2017)-
dc.identifier.conferencecountryCH-
dc.identifier.conferencelocationTaipei-
dc.contributor.localauthorPark, Jong-Cheol-
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CS-Conference Papers(학술회의논문)
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