Georgenia daeguensis sp nov., isolated from 4-chlorophenol enrichment culture

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dc.contributor.authorWoo, Sung-Geunko
dc.contributor.authorCui, Ying-Shunko
dc.contributor.authorKang, Myung-Sukko
dc.contributor.authorJin, Longko
dc.contributor.authorKim, Kwang-Kyuko
dc.contributor.authorLee, Sung-Taikko
dc.contributor.authorLee, Myung-Jinko
dc.contributor.authorPark, Joon-Hongko
dc.date.accessioned2013-03-12T15:26:32Z-
dc.date.available2013-03-12T15:26:32Z-
dc.date.created2012-10-30-
dc.date.created2012-10-30-
dc.date.issued2012-07-
dc.identifier.citationINTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, v.62, pp.1703 - 1709-
dc.identifier.issn1466-5026-
dc.identifier.urihttp://hdl.handle.net/10203/102725-
dc.description.abstractDuring screening for 4-chlorophenol-degrading micro-organisms in activated sludge from industrial wastewater treatment, a Gram-positive, rod-shaped, aerobic bacterial strain, designated 2C6-43(T), was isolated and characterized taxonomically by using a polyphasic approach. Comparative 16S rRNA gene sequence analysis showed that strain 2C6-43(T) belongs to the family Bogoriellaceae, class Actinobacteria, and is related most closely to Georgenia soli CC-NMPT-T3(T) (98.8 % sequence similarity), Georgenia muralis 1A-C-T (97.6 %), Georgenia thermotolerans TT02-04(T) (96.8 %), Georgenia ruanii YIM 004(T) (96.6 %) and Georgenia halophila YIM 93316(T) (96.0 %). The G+C content of the genomic DNA of strain 2C6-43(T) was 66.2 mol%. Sugars from whole-cell hydrolysates found in strain 2C6-43(T) were rhamnose, ribose and galactose. The menaquinone MK-8(H-4) was detected as the predominant quinone. Polar lipid analysis of 2C6-43(T) revealed diphosphatidylglycerol, phosphatidylinositol mannoside, phosphatidylinositol and phosphatidylglycerol. An aromatic compound ring cleavage enzyme of catechol 1,2-dioxygenase was detected but catechol 2,3-dioxygenase was not detected in 2C6-43(T). A fatty acid profile with anteiso-C-15:0, iso-C-15:0 and C-16:0 as the major components supported the affiliation of strain 2C6-43(T) to the genus Georgenia. However, the DNA-DNA relatedness between strain 2C6-43(T) and the type strains of five species of the genus Georgenia ranged from 17 to 40 %, clearly showing that the isolate constitutes a new genospecies. Strain 2C6-43(T) could be clearly differentiated from its phylogenetic neighbours on the basis of some phenotypic, genotypic and chemotaxonomic features. Therefore, strain 2C6-43(T) is considered to represent a novel species of the genus Georgenia, for which the name Georgenia daeguensis sp. nov. is proposed; the type strain is 2C6-43(T) (=KCTC 19801(T)=JCM 17459(T)).-
dc.languageEnglish-
dc.publisherSOC GENERAL MICROBIOLOGY-
dc.subjectPERFORMANCE LIQUID-CHROMATOGRAPHY-
dc.subjectAD-HOC-COMMITTEE-
dc.subjectDEOXYRIBONUCLEIC-ACID-
dc.subjectEMENDED DESCRIPTION-
dc.subjectSPECIES DEFINITION-
dc.subjectFOREST SOIL-
dc.subjectBACTERIOLOGY-
dc.subjectSTRAINS-
dc.subjectSLUDGE-
dc.subjectTREES-
dc.titleGeorgenia daeguensis sp nov., isolated from 4-chlorophenol enrichment culture-
dc.typeArticle-
dc.identifier.wosid000307861500040-
dc.identifier.scopusid2-s2.0-84863680012-
dc.type.rimsART-
dc.citation.volume62-
dc.citation.beginningpage1703-
dc.citation.endingpage1709-
dc.citation.publicationnameINTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY-
dc.identifier.doi10.1099/ijs.0.033217-0-
dc.contributor.localauthorLee, Sung-Taik-
dc.contributor.nonIdAuthorWoo, Sung-Geun-
dc.contributor.nonIdAuthorKang, Myung-Suk-
dc.contributor.nonIdAuthorKim, Kwang-Kyu-
dc.contributor.nonIdAuthorLee, Myung-Jin-
dc.contributor.nonIdAuthorPark, Joon-Hong-
dc.type.journalArticleArticle-
dc.subject.keywordPlusPERFORMANCE LIQUID-CHROMATOGRAPHY-
dc.subject.keywordPlusAD-HOC-COMMITTEE-
dc.subject.keywordPlusDEOXYRIBONUCLEIC-ACID-
dc.subject.keywordPlusEMENDED DESCRIPTION-
dc.subject.keywordPlusSPECIES DEFINITION-
dc.subject.keywordPlusFOREST SOIL-
dc.subject.keywordPlusBACTERIOLOGY-
dc.subject.keywordPlusSTRAINS-
dc.subject.keywordPlusSLUDGE-
dc.subject.keywordPlusTREES-
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